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530 commits

Author SHA1 Message Date
Starbeamrainbowlabs 45c76ba252
typo 2023-03-03 22:46:02 +00:00
Starbeamrainbowlabs c909cfd3d1
fixup 2023-03-03 22:45:34 +00:00
Starbeamrainbowlabs 0734201107
dlr: tf graph changes 2023-03-03 22:44:49 +00:00
Starbeamrainbowlabs 750f46dbd2
debug 2023-03-03 22:39:30 +00:00
Starbeamrainbowlabs 5472729f5e
dlr: fixup argmax & y_true/y_pred 2023-03-03 22:37:36 +00:00
Starbeamrainbowlabs bc734a29c6
y_true is one-hot, convert to sparse 2023-03-03 22:20:11 +00:00
Starbeamrainbowlabs c7b577ab29
specificity: convert to plaintf 2023-03-03 22:16:48 +00:00
Starbeamrainbowlabs 26cc824ace
dlr: MeanIoU fixup 2023-03-03 22:10:49 +00:00
Starbeamrainbowlabs e9dcbe3863
dlr: fixup 2023-03-03 22:09:05 +00:00
Starbeamrainbowlabs 5c6789bf40
meaniou: implement one-hot version 
it expects sparse, but our output is one-hot.
 2023-03-03 22:04:21 +00:00
Starbeamrainbowlabs 6ffda40d48
fixup 2023-03-03 21:54:45 +00:00
Starbeamrainbowlabs 9b13e9ca5b
dlr: fixup argmax first 2023-03-03 21:51:24 +00:00
Starbeamrainbowlabs 7453c607ed
argmax for sensitivity & specificity too 2023-03-03 21:49:33 +00:00
Starbeamrainbowlabs 8470aec996
dlr: fixup 2023-03-03 21:45:51 +00:00
Starbeamrainbowlabs 3d051a8874
dlr: HACK: argmax to convert [64,128,128, 2] → [64,128,128] 2023-03-03 21:41:26 +00:00
Starbeamrainbowlabs 94a32e7144
dlr: fix metrics 2023-03-03 20:37:22 +00:00
Starbeamrainbowlabs c7f96ab6ab
dlr: typo 2023-03-03 20:23:03 +00:00
Starbeamrainbowlabs 06f956dc07
dlr: default LOSS, EPOCHS, and PREDICT_COUNT to better values 
Ref recent experiments
 2023-03-03 20:17:08 +00:00
Starbeamrainbowlabs b435cc54dd
dlr: add sensitivity (aka recall) and specificity metrics 2023-03-03 20:00:05 +00:00
Starbeamrainbowlabs 483ecf11c8
add specificity metric 2023-03-03 19:35:20 +00:00
Starbeamrainbowlabs d464c9f57d
dlr: add dice loss as metric 
more metrics to go tho
 2023-03-03 19:34:55 +00:00
Starbeamrainbowlabs f70083bea4
dlr eo: set custom_objects when loading model 2023-03-01 17:19:10 +00:00
Starbeamrainbowlabs b5f23e76d1
dlr eo: allow setting DIR_OUTPUT directly 2023-03-01 16:54:15 +00:00
Starbeamrainbowlabs 4fd9feba4f
dlr eo: tidyup 2023-03-01 16:47:36 +00:00
Starbeamrainbowlabs 69b5ae8838
dlr eo: this should fix it 2023-02-23 17:24:30 +00:00
Starbeamrainbowlabs 9f1cee2927
dlr eo: cheese it by upsampling and then downsampling again 2023-02-23 16:47:00 +00:00
Starbeamrainbowlabs 96b94ec55b
upsampling test 2023-02-23 16:19:44 +00:00
Starbeamrainbowlabs 747ddfd41b
weird, XLA_FLAGS cuda data dir wasn't needed before 
libdevice not found at ./libdevice.10.bc
 2023-02-10 13:28:34 +00:00
Starbeamrainbowlabs e43274cd91
dlr eo: add VAL_STEPS_PER_EPOCH 2023-02-03 16:41:30 +00:00
Starbeamrainbowlabs 8446a842d1
typo 2023-02-03 16:01:54 +00:00
Starbeamrainbowlabs 1a8f10339a
LayerConvNeXtGamma: fix for mixed precision mode 2023-02-02 16:22:08 +00:00
Starbeamrainbowlabs a630db2c49
dlr eo: fixup 2023-02-02 16:17:52 +00:00
Starbeamrainbowlabs 2bf1872aca
dlr eo: add JIT_COMPILE and MIXED_PRECISION 2023-02-02 16:14:09 +00:00
Starbeamrainbowlabs 71088b8c0b
typo 2023-02-02 15:48:49 +00:00
Starbeamrainbowlabs f7666865a0
dlr eo: add STEPS_PER_EXECUTION 2023-02-02 15:47:08 +00:00
Starbeamrainbowlabs f8202851a1
dlr eo: add LEARNING_RATE 2023-01-27 16:51:13 +00:00
Starbeamrainbowlabs fb898ea72b
slurm eo: seriously....? 2023-01-26 17:02:33 +00:00
Starbeamrainbowlabs be946091b1
slurm eo: DIR_OUTPUT → DIRPATH_OUTPUT 2023-01-26 16:52:14 +00:00
Starbeamrainbowlabs 4703bdbea1
SLURM: add job file for encoderonly 
It's pretty much bugfixed, but illykin doesn't have enough RAM to support it at the moment :-(
 2023-01-20 20:32:35 +00:00
Starbeamrainbowlabs 818d77c733
Make dirpath_rainfallwater consistent with other experiments 2023-01-20 20:31:26 +00:00
Starbeamrainbowlabs e72d3991b8
switch to a smaller ConvNeXt 2023-01-20 19:14:38 +00:00
Starbeamrainbowlabs e1ad16a213
debug A 2023-01-20 18:58:45 +00:00
Starbeamrainbowlabs 65a2e16a4c
ds_eo: lower memory usage 2023-01-20 18:55:52 +00:00
Starbeamrainbowlabs b5e68fc1a3
eo: don't downsample ConvNeXt at beginning 2023-01-20 18:49:46 +00:00
Starbeamrainbowlabs d5fdab50ed
dlreo: missing import 2023-01-20 18:40:35 +00:00
Starbeamrainbowlabs 4514086dc6
make_encoderonly: kwargs 2023-01-20 18:39:35 +00:00
Starbeamrainbowlabs 35dbd3f8bc
ds eo: scale up rainfall data 
It's taken most fo the afternoon to spot this one 🤦
 2023-01-20 18:37:08 +00:00
Starbeamrainbowlabs 5b54ceec48
ds eo: debug 2023-01-20 18:36:14 +00:00
Starbeamrainbowlabs a3787f0647
debug 2023-01-20 18:34:56 +00:00
Starbeamrainbowlabs 9bd5e0f7a3
ds_eo: debug 
there's something fishy going on here.
 2023-01-20 17:25:22 +00:00
Starbeamrainbowlabs aa3831bc4f
ds_eo: pass water to reshape 2023-01-17 19:07:16 +00:00
Starbeamrainbowlabs a01c49414f
ds_eo: typo 2023-01-17 19:06:29 +00:00
Starbeamrainbowlabs b9bea26d26
ds_eo: rogue variables 2023-01-17 19:03:14 +00:00
Starbeamrainbowlabs 64c57bbc21
dlr: add no-requeue 
Ref https://support.hull.ac.uk/tas/public/ssp/content/detail/incident?unid=652db7ac6e73485c9f7658db78b2b628
 2023-01-17 18:20:26 +00:00
Starbeamrainbowlabs a28bbb9cf7
encoderonly: make executable 2023-01-17 17:55:10 +00:00
Starbeamrainbowlabs 835b376c72
slurm dlr: log exit code 2023-01-17 15:18:26 +00:00
Starbeamrainbowlabs 40a550f155
slurm dlr: fixup 2023-01-16 18:45:08 +00:00
Starbeamrainbowlabs 7bcf13f8d8
dlr: typo 2023-01-16 18:02:09 +00:00
Starbeamrainbowlabs 6ff2864d23
slurm dlr: shell out in conda; redirect stderr & stdout to disk inside the experiments folder 
Also, if the job restarts, we still save the previous run's results because we append rather than overwrite
 2023-01-16 17:32:22 +00:00
Starbeamrainbowlabs 0b31c9e700
log start time, end time, and elapsed 
just in case...!
 2023-01-16 17:30:20 +00:00
Starbeamrainbowlabs 1a4ac3ed66
encoderonly: add graph plotting 2023-01-13 19:08:38 +00:00
Starbeamrainbowlabs 82e01da70b
fixup.... again 
oops
 2023-01-13 18:47:29 +00:00
Starbeamrainbowlabs 7b10f5c5fe
dlr: add learning_rate env var 2023-01-13 18:29:39 +00:00
Starbeamrainbowlabs 2f0ce0aa13
again 2023-01-13 18:27:03 +00:00
Starbeamrainbowlabs e04d6ab1b6
fixup again 2023-01-13 18:23:32 +00:00
Starbeamrainbowlabs 37d1598b0b
loss cel+dice: fixup 2023-01-13 18:21:11 +00:00
Starbeamrainbowlabs 0f0b691b5d
loss cel + dice: fixup 2023-01-13 18:09:31 +00:00
Starbeamrainbowlabs be77f035c8
dlr: add cross-entropy + dice loss fn option 2023-01-13 17:58:00 +00:00
Starbeamrainbowlabs b2a5acaf4e
dlr dsm: clash 2023-01-13 17:26:38 +00:00
Starbeamrainbowlabs f7672db599
annoying 2023-01-13 17:00:47 +00:00
Starbeamrainbowlabs 3c4d1c5140
dlr: Add support for stripping isolated water pixels 
That is, water pixels that have no other water pixels immediately adjacent thereto (diagonals count).
 2023-01-13 16:57:26 +00:00
Starbeamrainbowlabs ce1467461d
fixup 2023-01-13 16:47:52 +00:00
Starbeamrainbowlabs 0b676fa391
move shuffle to subdir 2023-01-13 16:47:35 +00:00
Starbeamrainbowlabs 2edfb1a21f
dlr predict: comment debug 2023-01-12 19:20:22 +00:00
Starbeamrainbowlabs f0dd9711ed
dlr: fixup 2023-01-12 18:55:33 +00:00
Starbeamrainbowlabs 176dc022a0
add moar env vars 2023-01-12 18:54:39 +00:00
Starbeamrainbowlabs 0d41bbba94
dlr predict: output with higher quality 2023-01-12 18:43:48 +00:00
Starbeamrainbowlabs 1b5bb14d8f
dlr: debug 2023-01-12 18:35:29 +00:00
Starbeamrainbowlabs 20f7d34fd1
fixup 2023-01-12 18:21:20 +00:00
Starbeamrainbowlabs c0c6e81c01
dlr predict: allow for multiple outputs 2023-01-12 18:12:50 +00:00
Starbeamrainbowlabs 864dfa802d
dlr/predict typo 2023-01-12 18:03:06 +00:00
Starbeamrainbowlabs 0140e93bbd
dlr: trying a thing 2023-01-12 18:00:16 +00:00
Starbeamrainbowlabs e1666026ad
dlr/predict: let's try another way 2023-01-12 17:56:59 +00:00
Starbeamrainbowlabs e7c0328648
typo 2023-01-12 16:58:23 +00:00
Starbeamrainbowlabs 376eecc29f
dlr: try plotting the label too 
https://www.youtube.com/watch?v=03qwgVJbNas
 2023-01-12 16:13:04 +00:00
Starbeamrainbowlabs be7dd91f88
fix crash 'cause we're only plotting 1 thing 2023-01-11 17:41:55 +00:00
Starbeamrainbowlabs 3787155665
dlr: we can't plot the input tensor because it has 8 channels rather than 1 or 3 2023-01-11 17:39:14 +00:00
Starbeamrainbowlabs 373dda03b5
missing comma 2023-01-11 17:28:13 +00:00
Starbeamrainbowlabs 7be0509ac8
dlr: slurm PATH_CHECKPOINT 2023-01-11 17:27:26 +00:00
Starbeamrainbowlabs a69c809008
dlr: slurm, load checkpoint 2023-01-11 17:26:57 +00:00
Starbeamrainbowlabs 93e663e45d
add optional PATH_CHECKPOINT env var 2023-01-11 17:20:19 +00:00
Starbeamrainbowlabs 0e3de8f5fc
dlr: fix predictions 2023-01-10 19:19:30 +00:00
Starbeamrainbowlabs 2591cbe6bc
slurm dlr: quiet, pip 2023-01-10 18:12:35 +00:00
Starbeamrainbowlabs 1958c4e6c2
encoderonly model: getting there 2023-01-09 19:33:41 +00:00
Starbeamrainbowlabs 4b7df39fac
bugfix 2023-01-09 18:25:16 +00:00
Starbeamrainbowlabs 581006cbe6
dlr: save checkpoints 2023-01-09 18:03:23 +00:00
Starbeamrainbowlabs 52cf66ca32
start working on a quick encoder test, but it's far from finished 2023-01-06 19:55:52 +00:00
Starbeamrainbowlabs f080af0b57
identity test: plot binarised heightmap 2023-01-06 19:03:06 +00:00
Starbeamrainbowlabs 36859746ff
dlr: fix crash 2023-01-06 17:13:35 +00:00
Starbeamrainbowlabs bcf198d47b
mono identity test: output 2023-01-06 17:08:18 +00:00