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https://github.com/sbrl/research-rainfallradar
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dlr: add UPSAMPLE env var
...AND actually add the functionality this time!
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2 changed files with 16 additions and 5 deletions
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@ -6,7 +6,7 @@
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#SBATCH -o %j.%N.%a.deeplab-rainfall.out.log
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#SBATCH -o %j.%N.%a.deeplab-rainfall.out.log
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#SBATCH -e %j.%N.%a.deeplab-rainfall.err.log
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#SBATCH -e %j.%N.%a.deeplab-rainfall.err.log
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#SBATCH -p gpu
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#SBATCH -p gpu
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#SBATCH --no-requeue
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#SBATCH --no-requeue
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#SBATCH --time=5-00:00:00
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#SBATCH --time=5-00:00:00
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#SBATCH --mem=30000
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#SBATCH --mem=30000
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# ---> in MiB
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# ---> in MiB
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@ -41,6 +41,7 @@ show_help() {
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echo -e " WATER_THRESHOLD The threshold to cut water off at when training, in metres. Default: 0.1" >&2;
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echo -e " WATER_THRESHOLD The threshold to cut water off at when training, in metres. Default: 0.1" >&2;
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echo -e " PATH_CHECKPOINT The path to a checkcpoint to load. If specified, a model will be loaded instead of being trained." >&2;
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echo -e " PATH_CHECKPOINT The path to a checkcpoint to load. If specified, a model will be loaded instead of being trained." >&2;
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echo -e " LEARNING_RATE The learning rate to use. Default: 0.001." >&2;
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echo -e " LEARNING_RATE The learning rate to use. Default: 0.001." >&2;
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echo -e " UPSAMPLE How much to upsample by at the beginning of the model. A value of disables upscaling. Default: 2." >&2;
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echo -e " PREDICT_COUNT The number of items from the (SCRAMBLED) dataset to make a prediction for." >&2;
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echo -e " PREDICT_COUNT The number of items from the (SCRAMBLED) dataset to make a prediction for." >&2;
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echo -e " POSTFIX Postfix to append to the output dir (auto calculated)." >&2;
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echo -e " POSTFIX Postfix to append to the output dir (auto calculated)." >&2;
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echo -e " ARGS Optional. Any additional arguments to pass to the python program." >&2;
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echo -e " ARGS Optional. Any additional arguments to pass to the python program." >&2;
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@ -50,6 +50,7 @@ LOSS = os.environ["LOSS"] if "LOSS" in os.environ else "cross-entropy-dice"
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DICE_LOG_COSH = True if "DICE_LOG_COSH" in os.environ else False
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DICE_LOG_COSH = True if "DICE_LOG_COSH" in os.environ else False
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LEARNING_RATE = float(os.environ["LEARNING_RATE"]) if "LEARNING_RATE" in os.environ else 0.001
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LEARNING_RATE = float(os.environ["LEARNING_RATE"]) if "LEARNING_RATE" in os.environ else 0.001
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WATER_THRESHOLD = float(os.environ["WATER_THRESHOLD"]) if "WATER_THRESHOLD" in os.environ else 0.1
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WATER_THRESHOLD = float(os.environ["WATER_THRESHOLD"]) if "WATER_THRESHOLD" in os.environ else 0.1
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UPSAMPLE = int(os.environ["UPSAMPLE"]) if "UPSAMPLE" in os.environ else 2
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DIR_OUTPUT=os.environ["DIR_OUTPUT"] if "DIR_OUTPUT" in os.environ else f"output/{datetime.utcnow().date().isoformat()}_deeplabv3plus_rainfall_TEST"
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DIR_OUTPUT=os.environ["DIR_OUTPUT"] if "DIR_OUTPUT" in os.environ else f"output/{datetime.utcnow().date().isoformat()}_deeplabv3plus_rainfall_TEST"
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@ -135,9 +136,14 @@ if PATH_CHECKPOINT is None:
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return output
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return output
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def DeeplabV3Plus(image_size, num_classes, num_channels=3, backbone="resnet"):
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def DeeplabV3Plus(image_size, num_classes, num_channels=3, backbone="resnet", upsample=2):
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model_input = tf.keras.Input(shape=(image_size, image_size, num_channels))
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model_input = tf.keras.Input(shape=(image_size, image_size, num_channels))
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if upsample > 1:
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logger.info(f"[DeepLabV3+] Upsample enabled @ {upsample}x")
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x = tf.keras.layers.UpSampling2D(size=2)(model_input)
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x = tf.keras.layers.UpSampling2D(size=2)(model_input)
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else:
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logger.info(f"[DeepLabV3+] Upsample disabled")
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x = model_input
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match backbone:
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match backbone:
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case "resnet":
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case "resnet":
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@ -168,8 +174,12 @@ if PATH_CHECKPOINT is None:
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model_output = tf.keras.layers.Conv2D(num_classes, kernel_size=(1, 1), padding="same")(x)
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model_output = tf.keras.layers.Conv2D(num_classes, kernel_size=(1, 1), padding="same")(x)
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return tf.keras.Model(inputs=model_input, outputs=model_output)
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return tf.keras.Model(inputs=model_input, outputs=model_output)
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model = DeeplabV3Plus(
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model = DeeplabV3Plus(image_size=IMAGE_SIZE, num_classes=NUM_CLASSES, num_channels=8)
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image_size=IMAGE_SIZE,
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num_classes=NUM_CLASSES,
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upsample=UPSAMPLE,
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num_channels=8
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)
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summarywriter(model, os.path.join(DIR_OUTPUT, "summary.txt"))
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summarywriter(model, os.path.join(DIR_OUTPUT, "summary.txt"))
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else:
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else:
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model = tf.keras.models.load_model(PATH_CHECKPOINT, custom_objects={
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model = tf.keras.models.load_model(PATH_CHECKPOINT, custom_objects={
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