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slurm: fixup

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Starbeamrainbowlabs 2022-11-01 19:57:15 +00:00
parent bc0e5f05a8
commit 441ad92b12
Signed by: sbrl
GPG key ID: 1BE5172E637709C2
1 changed files with 3 additions and 1 deletions
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4
rainfallwrangler/slurm-process.job
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@ -9,6 +9,8 @@
#SBATCH --mem=8096 #SBATCH --mem=8096
# * 8GB RAM # * 8GB RAM
set -e;
module load utilities/multi module load utilities/multi
module load readline/7.0 module load readline/7.0
module load gcc/10.2.0 module load gcc/10.2.0
@ -20,7 +22,7 @@ module load python/anaconda/4.6/miniconda/3.7
RAINFALL="${RAINFALL:-$HOME/data/nimrod_ceda.jsonl.gz}"; RAINFALL="${RAINFALL:-$HOME/data/nimrod_ceda.jsonl.gz}";
WATER="${WATER:-$HOME/data/WaterDepths-new.stream.asc.gz}"; WATER="${WATER:-$HOME/data/WaterDepths-new.stream.asc.gz}";
OUTPUT="${OUTPUT}"; OUTPUT="${OUTPUT}";
COUNT_FILE="${COUNT_FILE:4096}"; COUNT_FILE="${COUNT_FILE:-4096}";
if [[ -z "${WATER}" ]]; then if [[ -z "${WATER}" ]]; then
echo "Error: No input water depth file specified in the WATER environment variable."; echo "Error: No input water depth file specified in the WATER environment variable.";