#!/usr/bin/env bash #SBATCH -J EncORain #SBATCH -N 1 #SBATCH -n 14 #SBATCH --gres=gpu:1 #SBATCH -o %j.%N.%a.encoderonly-rainfall.out.log #SBATCH -e %j.%N.%a.encoderonly-rainfall.err.log #SBATCH -p gpu #SBATCH --no-requeue #SBATCH --time=5-00:00:00 #SBATCH --mem=30000 # ---> in MiB # no-requeue: ref https://support.hull.ac.uk/tas/public/ssp/content/detail/incident?unid=652db7ac6e73485c9f7658db78b2b628 module load utilities/multi module load readline/7.0 module load gcc/10.2.0 module load cuda/11.5.0 export XLA_FLAGS="--xla_gpu_cuda_data_dir=/home/ViperAppsFiles/cuda/11.5.0"; # weird... this wasn't needed before? module load python/anaconda/4.6/miniconda/3.7 show_help() { echo -e "Trains a TEST encoderonly model using rainfall radar and water depth data." >&2; echo -e "" >&2; echo -e "Usage:" >&2; echo -e " sbatch slurm-encoderonly-rainfall.job" >&2; echo -e "" >&2; echo -e "....where:" >&2; echo -e " BATCH_SIZE=64 Optional. Sets the batch size to train the model with." >&2; echo -e " DIRPATH_RAINFALLWATER The path to the directory the .tfrecord files containing the rainfall radar / water depth data." >&2; echo -e " PATH_HEIGHTMAP The path to the heightmap jsonl file to read in." >&2; # echo -e " PATH_COLOURMAP The path to the colourmap for predictive purposes." >&2; echo -e " CHANNELS=8 The number of channels the input data has." >&2; echo -e " WINDOW_SIZE=33 The window size to use when convolving the input dataset for single pixel prediction." >&2; echo -e " STEPS_PER_EPOCH The number of steps to consider an epoch. Defaults to None, which means use the entire dataset." >&2; echo -e " VAL_STEPS_PER_EPOCH The number of validation steps to consider an epoch. Defaults to None, which means use the entire dataset." >&2; echo -e " STEPS_PER_EXECUTION The number of steps to do before returning to do callbacks. High numbers boost performance. Defaults to 1. If set then STEPS_PER_EPOCH and VAL_STEPS_PER_EPOCH must also be set." >&2; echo -e " EPOCHS=25 The number of epochs to train for." >&2; echo -e " LEARNING_RATE The learning rate to use. Default: 0.001." >&2; # echo -e " NO_REMOVE_ISOLATED_PIXELS Set to any value to avoid the engine from removing isolated pixels - that is, water pixels with no other surrounding pixels, either side to side to diagonally." >&2; # echo -e " PATH_CHECKPOINT The path to a checkcpoint to load. If specified, a model will be loaded instead of being trained." >&2; # echo -e " PREDICT_COUNT The number of items from the (SCRAMBLED) dataset to make a prediction for." >&2; echo -e " POSTFIX Postfix to append to the output dir (auto calculated)." >&2; echo -e " ARGS Optional. Any additional arguments to pass to the python program." >&2; echo -e "" >&2; echo -e "It is strongly advised that all filepaths do NOT contain spaces." >&2; exit; } DIRPATH_RAINFALLWATER="${DIRPATH_RAINFALLWATER:-$HOME/rainfallwater_records_tfrecord}"; PATH_HEIGHTMAP="${PATH_HEIGHTMAP:-$HOME/data/terrain50-nimrodsized.json.gz}"; PATH_COLOURMAP="${PATH_COLOURMAP:-$HOME/data/instance-level-human-parsing/instance-level_human_parsing/human_colormap.mat}"; CODE="encoderonly_rainfall"; if [[ -n "${POSTFIX}" ]]; then echo -e ">>> Applying postfix of ${POSTFIX}" >&2; CODE="${CODE}_${POSTFIX}"; fi DIRPATH_OUTPUT="output/$(date -u --rfc-3339=date)_${CODE}"; mkdir -p "${DIRPATH_OUTPUT}"; echo -e ">>> NOW: $(date)"; echo -e ">>> DIR_OUTPUT: ${DIR_OUTPUT}"; echo -e ">>> Additional args: ${ARGS}"; export PATH=$HOME/software/bin:$PATH; export BATCH_SIZE DIRPATH_RAINFALLWATER PATH_HEIGHTMAP STEPS_PER_EPOCH VAL_STEPS_PER_EPOCH DIRPATH_OUTPUT PATH_CHECKPOINT CHANNELS WINDOW_SIZE EPOCHS LEARNING_RATE STEPS_PER_EXECUTION; #LOSS ; echo ">>> Installing requirements"; conda run -n py38 pip install -q -r requirements.txt; echo ">>> Training model"; #shellcheck disable=SC2016 /usr/bin/env time -v conda run -n py38 bash -c 'src/encoderonly_test_rainfall.py >>"${DIRPATH_OUTPUT}/experiment.${SLURM_JOB_ID}.out.log" 2>>"${DIRPATH_OUTPUT}/experiment.${SLURM_JOB_ID}.err.log"; echo "[slurm_runner] EXIT_CODE: $?" >>"${DIRPATH_OUTPUT}/experiment.${SLURM_JOB_ID}.out.log";'; echo ">>> exited with code $?";