From fe813cb46db6d99cd4a71ec5c4b71faf507ffd94 Mon Sep 17 00:00:00 2001 From: Starbeamrainbowlabs Date: Mon, 3 Oct 2022 16:03:26 +0100 Subject: [PATCH] slurm predict: fix plotting subcall --- aimodel/slurm-pretrain-predict.job | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/aimodel/slurm-pretrain-predict.job b/aimodel/slurm-pretrain-predict.job index ab77c2f..7d256c1 100755 --- a/aimodel/slurm-pretrain-predict.job +++ b/aimodel/slurm-pretrain-predict.job @@ -85,5 +85,6 @@ echo COMMAND: conda run -n py38 /usr/bin/env time -v src/index.py pretrain-predi conda run -n py38 /usr/bin/env time -v src/index.py pretrain-predict --input "${INPUT}" --output "${filepath_output}" -c "${CHECKPOINT}" ${ARGS} echo ">>> exited with code $?"; -INPUT="${filepath_output}" POSTFIX="${POSTFIX}" sbatch slurm-pretrain-plot.job +dirpath_output="$(dirname "${filepath_output}")"; +INPUT="${dirpath_output}" POSTFIX="${POSTFIX}" sbatch slurm-pretrain-plot.job echo ">>> Queued UMAP plot" \ No newline at end of file