research-rainfallradar/aimodel/src/rainfallwater_data_explorer.ipynb

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{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"id": "1f6fdebf-69c5-46ab-a5a8-f9c91f000ff3",
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"2022-10-24 17:18:42.868504: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:42.868519: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.\n"
]
}
],
"source": [
"import sys\n",
"\n",
"import tensorflow as tf\n",
"\n",
"from lib.dataset.dataset_segmenter import dataset_predict"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "4a6a94dd-5c4e-4481-bfae-eb5ccf6214db",
"metadata": {},
"outputs": [],
"source": [
"dirpath=\"/home/bryan-smithl/Documents/repos/PhD-Rainfall-Radar/aimodel/output/rainfallwater_records_embed_2022-10-06_contrast_embed_umap_d512e19_tfrecord\""
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "d1aa931a-ecf2-4134-8e70-87db4ae60736",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"DEBUG:dataset ITEM rainfall:shape (512,) water:shape (94, 94, 1)\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2022-10-24 17:18:44.582661: I tensorflow/stream_executor/cuda/cuda_gpu_executor.cc:975] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero\n",
"2022-10-24 17:18:44.583031: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583152: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcublas.so.11'; dlerror: libcublas.so.11: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583257: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcublasLt.so.11'; dlerror: libcublasLt.so.11: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583353: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcufft.so.10'; dlerror: libcufft.so.10: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583438: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcurand.so.10'; dlerror: libcurand.so.10: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583519: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcusolver.so.11'; dlerror: libcusolver.so.11: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583598: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcusparse.so.11'; dlerror: libcusparse.so.11: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583675: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcudnn.so.8'; dlerror: libcudnn.so.8: cannot open shared object file: No such file or directory\n",
"2022-10-24 17:18:44.583688: W tensorflow/core/common_runtime/gpu/gpu_device.cc:1850] Cannot dlopen some GPU libraries. Please make sure the missing libraries mentioned above are installed properly if you would like to use GPU. Follow the guide at https://www.tensorflow.org/install/gpu for how to download and setup the required libraries for your platform.\n",
"Skipping registering GPU devices...\n",
"2022-10-24 17:18:44.584534: I tensorflow/core/platform/cpu_feature_guard.cc:193] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 FMA\n",
"To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.\n"
]
}
],
"source": [
"dataset = dataset_predict(\n",
"\tdirpath_input=dirpath,\n",
"\twater_threshold=0.1,\n",
"\tshape_water_desired=[94, 94],\n",
"\tparallel_reads_multiplier=1.5 # Mangles the ordering. For counting things this doesn't matter\n",
").batch(64)"
]
},
{
"cell_type": "code",
"execution_count": 4,
"id": "456f7c8f-3f7d-4a2c-b361-900588c49612",
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"Processed 23100 batches\r"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"\n",
"Complete. Counts:\n",
"0: 10238285719\n",
"1: 2854828393\n"
]
}
],
"source": [
"i = 0\n",
"counts = tf.constant([0, 0], dtype=tf.int64)\n",
"for (items, label) in dataset:\n",
"\tstep_counts = tf.math.bincount(tf.reshape(label, [-1]))\n",
"\tcounts += tf.cast(step_counts, dtype=tf.int64)\n",
"\t# print(\"STEP counts\", counts, \"step_counts\", step_counts)\n",
"\ti += 1\n",
"\tif i % 100 == 0:\n",
"\t\tsys.stderr.write(f\"Processed {i} batches\\r\")\n",
"print(\"\\nComplete. Counts:\\n\"+\"\\n\".join([ str(i)+\": \"+str(count) for i,count in enumerate(counts.numpy().tolist()) ]))"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3.10.6 64-bit",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
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"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.10.6"
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"vscode": {
"interpreter": {
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}
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"nbformat": 4,
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